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J Microbiol Biotechnol ; 33(8): 1084-1090, 2023 Aug 28.
Artigo em Inglês | MEDLINE | ID: mdl-37218441

RESUMO

The strain KIST612, initially identified as E. limosum, was a suspected member of E. callanderi due to differences in phenotype, genotype, and average nucleotide identity (ANI). Here, we found that E. limosum ATCC 8486T and KIST612 are genetically different in their central metabolic pathways, such as that of carbon metabolism. Although 16S rDNA sequencing of KIST612 revealed high identity with E. limosum ATCC 8486T (99.2%) and E. callanderi DSM 3662T (99.8%), phylogenetic analysis of housekeeping genes and genome metrics clearly indicated that KIST612 belongs to E. callanderi. The phylogenies showed that KIST612 is closer to E. callanderi DSM 3662T than to E. limosum ATCC 8486T. The ANI between KIST612 and E. callanderi DSM 3662T was 99.8%, which was above the species cut-off of 96%, Meanwhile, the ANI value with E. limosum ATCC 8486T was not significant, showing only 94.6%. The digital DNA-DNA hybridization (dDDH) results also supported the ANI values. The dDDH between KIST612 and E. callanderi DSM 3662T was 98.4%, whereas between KIST612 and E. limosum ATCC 8486T, it was 57.8%, which is lower than the species cut-off of 70%. Based on these findings, we propose the reclassification of E. limosum KIST612 as E. callanderi KIST612.


Assuntos
Eubacterium , Ácidos Graxos , Filogenia , Eubacterium/genética , Eubacterium/metabolismo , DNA Ribossômico , Análise de Sequência de DNA , RNA Ribossômico 16S/genética , DNA Bacteriano/genética , DNA Bacteriano/metabolismo , Técnicas de Tipagem Bacteriana , Ácidos Graxos/metabolismo , Hibridização de Ácido Nucleico
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